力调控FLNa-Ig21/αIIbβ3-CT复合物结构稳定性的分子动力学研究
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国家自然科学基金项目(12172137, 12072117)


Structural Stability of Force-Regulated FLNa-Ig21/αIIbβ3-CT Complexes: Molecular Dynamics Simulation
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    摘要:

    目的 探究力对FLNa-Ig21/αIIbβ3-CT分子对的力学稳定性及力学调控机制。方法 FLNa-Ig21/αIIbβ3-CT晶体结构取自PDB数据库。通过平衡和拉伸分子动力学模拟,分析复合物生理环境下稳定性以及力诱导的解折叠路径和力学稳定性。结果 平衡过程中,FLNa-Ig21和αIIbβ3-CT之间大部分盐桥和氢键的生存率小于0.5,其结合强度相对较弱;恒速度拉伸过程中,复合物可承受170~380 pN的拉力,其力学强度与力诱导的解离路径有关;在0~60 pN恒力条件下,复合物呈现“滑移键”趋势,且力的增加有利于αIIbβ3近膜端R995-D723盐桥的解离和整合素的活化。结论 力诱导的αIIbβ3-CT近膜端异构可增强复合物的力学强度和解离时间的后移;突破20 pN阈值后,力正向调控整合素的活化。研究结果为深入揭示整合素αIIbβ3活化的分子机制及相关靶向药物开发提供参考。

    Abstract:

    Objective To investigate the effects of force on mechanical stability of FLNa-Ig21/αIIbβ3-CT complex and the regulation mechanism. Methods The FLNa-Ig21/αIIbβ3-CT crystal structures were taken from the PDB database. The stability of the complexes in a physiological environment as well as the unfolding path and mechanical stability induced by mechanical forces were analyzed using equilibrium and steered molecular dynamics simulations. Results During the equilibration, the survival rate of most salt bridge and hydrogen bonds was below 0.5, and the interactions between FLNa-Ig21 and αIIbβ3-CT was relatively weak. During stretching at a constant velocity, the complex could withstand a tensile force of 70–380 pN, and its mechanical strength depended on the force-induced dissociation path. Under a constant force of 0–60 pN, the complexes exhibited a slipping-bond trend, and the force increase facilitated the breakage of the R995-D723 salt bridge and the activation of αIIbβ3 integrin. Conclusions The force-induced allostery of αIIbβ3-MP enhanced the complex mechanical strength and delayed FLNa-Ig21 dissociation from αIIbβ3-CT. After the 20 pN threshold was exceeded, tensile force positively regulated the activation of αIIbβ3 integrin. These results provide references for further revealing the molecular mechanism of IIbβ3 integrin activation and related targeted drug development.

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任建芳,罗毅冲,吴建华,方颖.力调控FLNa-Ig21/αIIbβ3-CT复合物结构稳定性的分子动力学研究[J].医用生物力学,2024,39(1):46-54

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  • 收稿日期:2023-05-22
  • 最后修改日期:2023-07-07
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  • 在线发布日期: 2024-02-26
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